Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829906.1_cds_XP_016503979.1_17470
CDS Infomation

[gene=LOC107822000] [db_xref=GeneID:107822000] [protein=DUF21 domain-containing protein At4g14240-like] [protein_id=XP_016503979.1] [location=complement(join(2640..2690,3942..4023,4154..4200,4489..4867,4935..5008,5106..5193,5778..5845,6402..6473,6669..6752,7350..7463,7557..7640,8565..8641,8759..9008))] [gbkey=CDS]
Sequence

ATGGGTTCGCTAATGAATGTGGTAGCAATAGCCCTAGCTGCTGGCCGCAAAACAAAGAGA
CCCTTTGGTGTAGATGATCAGGACATTGAATTTGGGAACCCCTGGTGGTTTGTTTACGCC
GGTATTTCTTGTTTCCTCGTACTCTTCGCCGGAATTATGTCGGGTCTTACGTTGGGGTTA
ATGTCTATGGGACTTGTTGAGCTTGAAATTCTTCAACGAAGTGGTACTTCTACTGAGAAG
AAACAAGCAGCTACTATTTTTCCTGTTGTTCAAAAGCAGCATCAGCTTCTTGTGACTTTG
CTTTTATGTAATGCGGCTGCAATGGAGGCTCTTCCGATATACTTGGACAAAATTTTCCAT
CCAGTTGTTGCTGTTATTCTCTCTGTTACTTTTGTTTTAGCTTTTGGTGAGATTATTCCA
CAAGCTATATGCTCTCGGTATGGGCTGGCAGTAGGCGCAAACTTAGTGTGGCTTGTTCGT
GTTCTTATGATCATTTGCTATCCCATTGCTTACCCAATTGGAAAGGTTCTGGACGCTGTA
TTGGGACATCATGATGCTTTGTTCAGGCGAGCTCAGTTGAAAGCCCTTGTTTCTATTCAC
GGTCAGGAGGCTGGTAAAGGTGGCGAACTCACGCATGATGAAACTACTATTATTAGCGGA
GCACTGGATTTGACAGAAAAGACTGCTGAAGAGGCTATGACGCCTATTGAATCAACCTTT
TCCCTTGATGTCAATTCAAAGTTGGACTGGGAAGCAATTGGGAAAATCCTGGCACGAGGT
CATAGCCGTGTTCCTGTTTACTCTGGACATCCGAAGAACATTATTGGACTTCTACTGGTA
AAAAGCCTTCTCACGGTGCGTGCTGAGACAGAGACCCCCGTTAGTGCTGTTTCCATCAGG
AGAATGCCTAGGGTACCAGCAGATTTGCCTTTGTATGATATTCTCAATGAATTTCAAAAG
GGGAGCAGTCATATGGCAGCTGTAGTGAAAGTAAGCAAGAAAAGCTACAACCTTGCTTCT
GATCCAGCTGTTGAAAATGGCAGAGGAAACAAATTTTGTAATGGGGACTCACAGTTAACT
ACACCATTACTGTGCACGCATGATGAAAAGTCAGGCACCATAATTATAAATGTTGATAAG
GTCTCAATGCAGAATCAAGAAGCTAAATTACCCTCTTTGCATCAAAATGGTGTAGAAACG
AATAAATCAACATATCTACCAGAAGATATTGAAGAGGGGGAAGTCATTGGCATCATTACG
CTGGAAGATGTTTTTGAAGAACTCCTGCAGGAGGAAATCGTGGATGAGACTGACGTCTAT
GTTGATGTTCACAAAAGAATACGTGTAGCTGCTGCAGCTGCTGCTTCATCCGTTGCTCGA
GCACCGCCTGCTAGGAAAGCGACAGGTCAAAAGGCTTCGGGAGGGCAAGCAAAGCAAGGA
CGGACGCAAAAGAAGTCAGTTGAGGGATGA

Peptide Sequence

PEP ID

XP_016503979.1
PEP Infomation

PREDICTED: DUF21 domain-containing protein At4g14240-like [Nicotiana tabacum]
Sequence

MGSLMNVVAIALAAGRKTKRPFGVDDQDIEFGNPWWFVYAGISCFLVLFAGIMSGLTLGL
MSMGLVELEILQRSGTSTEKKQAATIFPVVQKQHQLLVTLLLCNAAAMEALPIYLDKIFH
PVVAVILSVTFVLAFGEIIPQAICSRYGLAVGANLVWLVRVLMIICYPIAYPIGKVLDAV
LGHHDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF
SLDVNSKLDWEAIGKILARGHSRVPVYSGHPKNIIGLLLVKSLLTVRAETETPVSAVSIR
RMPRVPADLPLYDILNEFQKGSSHMAAVVKVSKKSYNLASDPAVENGRGNKFCNGDSQLT
TPLLCTHDEKSGTIIINVDKVSMQNQEAKLPSLHQNGVETNKSTYLPEDIEEGEVIGIIT
LEDVFEELLQEEIVDETDVYVDVHKRIRVAAAAAASSVARAPPARKATGQKASGGQAKQG
RTQKKSVEG

Transcript Sequence

Gene sequence data has not been registered.